C. elegans Metabolic Network (Arenas)
Metabolic network of the nematode C. elegans.
npx keepset fetch arenas-celegans-metabolic
- Nodes
- 453
- Edges
- 4,596
- Size
- 13.6 KiB
Fetch and preview this dataset on this page, or download the result as JSON. The command line fetches it without a browser.
Overview
| Id | arenas-celegans-metabolic |
|---|
| Namespace | arenas |
|---|
| Aliases | celegans-metabolic |
|---|
| Category | graph/v1 |
|---|
| Kind | graph |
|---|
| Domain | Biological network |
|---|
| Licence | not recorded by the source |
|---|
| Catalogue | keepset 1.33.0 |
|---|
Sources and provenance
Citations
- J. Duch, A. Arenas (2005). Community identification using Extremal Optimization. Physical Review E 72, 027104.
Recipe
| Source | #0 |
|---|
| Archive | zip |
|---|
| Member | celegans_metabolic.net |
|---|
| Parser format | "pajek" |
|---|
| Parser encoding | "latin1" |
|---|
Crosswalk
keepset/topology to graph/v1, as a crossmap crosswalk.
| Rule | From | To | Direction |
|---|
| move | meta | meta | both |
| move | nodes[].id | nodes[].id | both |
| move | edges[].source | edges[].source | both |
| move | edges[].target | edges[].target | both |
Expected counts
Properties
| Components | 1 |
|---|
| Connected | yes |
|---|
| Cyclic | yes |
|---|
| Density | 0.009963 |
|---|
| Directed | no |
|---|
| Download bytes | 13.6 KiB |
|---|
| Edge types | 1 |
|---|
| Heterogeneous | no |
|---|
| Multigraph | yes |
|---|
| Node types | 1 |
|---|
| Raw bytes | 340.3 KiB |
|---|
| Self loops | yes |
|---|
| Weighted | no |
|---|