Yeast Protein Interaction Network
Protein-protein interaction network for Saccharomyces cerevisiae (yeast).
npx keepset fetch barabasi-protein-yeast
- Nodes
- 1,870
- Edges
- 4,480
- Size
- 14.9 KiB
Fetch and preview this dataset on this page, or download the result as JSON. The command line fetches it without a browser.
Overview
Sources and provenance
Citations
- H. Jeong, S. Mason, A.-L. Barabási, Z. N. Oltvai (2001). Centrality and lethality of protein networks. Nature 411, 41-42.
Recipe
| Source | #0 |
|---|
| Archive | gzip |
|---|
| Parser format | "edge-list" |
|---|
| Parser encoding | "utf-8" |
|---|
| Parser delimiter | "detect" |
|---|
| Parser skipLines | 0 |
|---|
| Parser commentPrefixes | ["#","%"] |
|---|
| Parser sourceColumn | 0 |
|---|
| Parser targetColumn | 1 |
|---|
Crosswalk
keepset/topology to graph/v1, as a crossmap crosswalk.
| Rule | From | To | Direction |
|---|
| move | meta | meta | both |
| move | nodes[].id | nodes[].id | both |
| move | edges[].source | edges[].source | both |
| move | edges[].target | edges[].target | both |
Expected counts
Properties
| Components | 173 |
|---|
| Connected | no |
|---|
| Cyclic | yes |
|---|
| Density | 0.001303 |
|---|
| Directed | no |
|---|
| Download bytes | 14.9 KiB |
|---|
| Edge types | 1 |
|---|
| Heterogeneous | no |
|---|
| Multigraph | yes |
|---|
| Node types | 1 |
|---|
| Raw bytes | 259 KiB |
|---|
| Self loops | yes |
|---|
| Weighted | no |
|---|